Commits · cfd821c9a63ae1449b09c51fa36f0cf40deb6a73 · MPBA Radiomics / RADLER · GitLab

19 Mar, 2020 3 commits
- Fix calculation of InactiveVolume feature · cfd821c9
  Alessia Marcolini authored Mar 19, 2020
  
  cfd821c9
- Fix dtype NumObjects · 5ebbe3f7
  Alessia Marcolini authored Mar 19, 2020
  
  5ebbe3f7
- Fix coordinates of SUVmax voxel in SUVPeak · d3f1d17b
  Alessia Marcolini authored Mar 19, 2020
  
  d3f1d17b
18 Mar, 2020 1 commit
- Extraction of intensity features depending on the modality · a9647f17
  Alessia Marcolini authored Mar 18, 2020
  
  a9647f17
17 Mar, 2020 3 commits
- Add octave setup steps · e2c4fea3
  Alessia Marcolini authored Mar 17, 2020
  
  e2c4fea3
- Add Add SUVPeak and fix PercentageInactive · b0719ab4
  Alessia Marcolini authored Mar 17, 2020
  
  b0719ab4
- Add gETU feature · 5276bb54
  Alessia Marcolini authored Mar 17, 2020
  
  5276bb54
16 Mar, 2020 9 commits
- Add conda environment configuration file + update README with setup steps · 67f4f876
  Alessia Marcolini authored Mar 16, 2020
  
  67f4f876
- Remove debug stuff · 3903899f
  Alessia Marcolini authored Mar 16, 2020
  
  3903899f
- Add AUCCSH and fix features numeration · 2d97a800
  Alessia Marcolini authored Mar 16, 2020
  
  2d97a800
- Fix docstrings as technically there is not any input to the functions · 638743ae
  Alessia Marcolini authored Mar 16, 2020
  
  638743ae
- Add TLG feature for PET modality · 93bf9547
  Alessia Marcolini authored Mar 16, 2020
  
  93bf9547
- Return superclass function return value · 158647d0
  Alessia Marcolini authored Mar 16, 2020
  
  158647d0
- Add SUVMax and SUVMean features for PET modality · 7296d372
  Alessia Marcolini authored Mar 16, 2020
  
  7296d372
- Import and use new · 2fa3bde1
  Alessia Marcolini authored Mar 16, 2020
  
  2fa3bde1
- PyRadiomics wrapper to implement custom functions and utilities · 90f38f72
  Alessia Marcolini authored Mar 16, 2020
  
  90f38f72
12 Mar, 2020 2 commits
- Add deep features extraction script · b961f1bf
  Alessia Marcolini authored Mar 12, 2020
  
  b961f1bf
- Check against PurePath interface · 2b1a6b2c
  Alessia Marcolini authored Mar 12, 2020
  
  2b1a6b2c
11 Mar, 2020 11 commits
- Fix typos · 149b70ac
  Alessia Marcolini authored Mar 11, 2020
  
  149b70ac
- Do not read clinical file as str · ced520e8
  Alessia Marcolini authored Mar 11, 2020
  
  ced520e8
- Use Path everywhere and update according to new dataset structure · 456b7009
  Alessia Marcolini authored Mar 11, 2020
  
  456b7009
- Change parameter name from 'label_file' to 'clinical_file' · 4b5d8d22
  Alessia Marcolini authored Mar 11, 2020
  
  4b5d8d22
- Rename training file · 798aa7bd
  Alessia Marcolini authored Mar 11, 2020
  
  798aa7bd
- Remove unused file · eb6c83a5
  Alessia Marcolini authored Mar 11, 2020
  
  eb6c83a5
- Modify train_test_indexes_patient_wise according to new dataset methods · 6c5fe9b2
  Alessia Marcolini authored Mar 11, 2020
  
  6c5fe9b2
- Handle subdatasets with property decorators · 1573ec4a
  Alessia Marcolini authored Mar 11, 2020
  
  1573ec4a
- Unified dataset according to new data structure · 6f3c869c
  Alessia Marcolini authored Mar 11, 2020
  
  6f3c869c
- Change dtype of labels to int · c88bb9d0
  Alessia Marcolini authored Mar 11, 2020
  
  c88bb9d0
- Extract all files + suppress warnings · 41d68d4e
  Alessia Marcolini authored Mar 11, 2020
  
  41d68d4e
10 Mar, 2020 2 commits
- Black formatting · f66b733a
  Alessia Marcolini authored Mar 10, 2020
  
  f66b733a
- Rename folder according to execution order · dd49a005
  Alessia Marcolini authored Mar 10, 2020
  
  dd49a005
06 Mar, 2020 7 commits
- Remove unused file · 2c7a1343
  Alessia Marcolini authored Mar 06, 2020
  
  2c7a1343
- Save npy with filename given in clinical file · 71bd2078
  Alessia Marcolini authored Mar 06, 2020
  
  71bd2078
- Add filename column in HN_BZ dataset · 8de02106
  Alessia Marcolini authored Mar 06, 2020
  
  8de02106
- Extract ROI volume according to new dataset structure · 34b94221
  Alessia Marcolini authored Mar 06, 2020
  
  34b94221
- Remove unused file · f439ea47
  Alessia Marcolini authored Mar 06, 2020
  
  f439ea47
- Select only available patients on filesystem and preprocess HN_BZ dataset · 63cbaf9c
  Alessia Marcolini authored Mar 06, 2020
  
  63cbaf9c
- Add ROI modality column to clinical file · 668dee72
  Alessia Marcolini authored Mar 06, 2020
  
  668dee72
05 Mar, 2020 2 commits
- Add ROI name column to clinical files · 56e662df
  Alessia Marcolini authored Mar 05, 2020
  
  56e662df
- Standardize dataset structure and associated clinical file · 7916909e
  Alessia Marcolini authored Mar 05, 2020
  
  7916909e