Commits · master · MPBA / phylogenetic-cnn · GitLab

20 Sep, 2017 6 commits
- added to gitignore possible names for output/results folder · f2a95e29
  Valerio Maggio authored Sep 20, 2017
  
  f2a95e29
- freezed phcnn brach for dap reference · b11e7420
  Valerio Maggio authored Sep 20, 2017
  
  b11e7420
- specified right version of theano to install from conda · 70aeaf6d
  Valerio Maggio authored Sep 20, 2017
  
  70aeaf6d
- added build step in mlpy installation - it might help · 1d690ba0
  Valerio Maggio authored Sep 20, 2017
  
  1d690ba0
- removed useless deps on mlpy that created probs w/ Py3K · 64a359ee
  Valerio Maggio authored Sep 20, 2017
  
  64a359ee
- fixed typo in Anaconda Env File - missing Env name · b6fefe67
  Valerio Maggio authored Sep 20, 2017
  
  b6fefe67
16 Sep, 2017 1 commit
- updated dap module to the latest release · 51c72dab
  Valerio Maggio authored Sep 16, 2017
  
  51c72dab
12 Sep, 2017 14 commits
- fixed path to load weights file for different disease · cb31c862
  Valerio Maggio authored Sep 12, 2017
  
  cb31c862
- added weights for transfer learning · 043765ba
  Valerio Maggio authored Sep 12, 2017
  
  043765ba
- Latest updates considering fix at Label_Binarise · 6c8bf585
  Valerio Maggio authored Sep 12, 2017
  
  6c8bf585
- revised and updated description and variable namings · e7530fc8
  Valerio Maggio authored Sep 12, 2017
  
  e7530fc8
- added link to notebooks in the README · 144cde44
  Valerio Maggio authored Sep 12, 2017
  
  144cde44
- fixed formattings of tt instructions · ef494cea
  Valerio Maggio authored Sep 12, 2017
  
  ef494cea
- updated README with missing references, additional instructions and fixed typos · 3e9fcaaf
  Valerio Maggio authored Sep 12, 2017
  
  3e9fcaaf
- added LICENSE (GNU GPLv3) and updated README · 4204d057
  Valerio Maggio authored Sep 12, 2017
  
  4204d057
- renamed reference to IBD dataset · 85691011
  Valerio Maggio authored Sep 12, 2017
  
  85691011
- Merge branch 'master' of gitlab.fbk.eu:MPBA/phylogenetic-cnn · a617bbed
  Valerio Maggio authored Sep 12, 2017
  
  a617bbed
- new fix on DAP modules on relative import · 84cd2f9c
  Valerio Maggio authored Sep 12, 2017
  
  84cd2f9c
- Added desciption for the runners and fixed some sentences · fc678ce7
  Diego Fioravanti authored Sep 12, 2017
  
  fc678ce7
- Added reference to the notebooks · 3dcbedf5
  Diego Fioravanti authored Sep 12, 2017
  
  3dcbedf5
- Notebook to illustrate how the PhyloConv1D layr can be used · 22dcb7ac
  Diego Fioravanti authored Sep 12, 2017
  
  22dcb7ac
11 Sep, 2017 19 commits
- Merge branch 'master' of gitlab.fbk.eu:MPBA/phylogenetic-cnn · ce020e8a
  Diego Fioravanti authored Sep 11, 2017
  
  ce020e8a
- removed useless import · 739f2e98
  Diego Fioravanti authored Sep 11, 2017
  
  739f2e98
- dap submodules switched to https · 7eaa6821
  Valerio Maggio authored Sep 11, 2017
  
  7eaa6821
- Merge branch 'master' of gitlab.fbk.eu:MPBA/phylogenetic-cnn · 9b05bc4c
  Valerio Maggio authored Sep 11, 2017
  
  9b05bc4c
- added notebook to replicate embeddings generation for ICDF · 7ac7aba4
  Valerio Maggio authored Sep 11, 2017
  
  7ac7aba4
- Merge branch 'master' of gitlab.fbk.eu:MPBA/phylogenetic-cnn · 13885f33
  Diego Fioravanti authored Sep 11, 2017
  
  13885f33
- First version of the readme, not complete + small spelling fix · 39e29ede
  Diego Fioravanti authored Sep 11, 2017
  
  39e29ede
- removed temporary folders and unused ones · 84fdaff5
  Valerio Maggio authored Sep 11, 2017
  
  84fdaff5
- renamed true_data folder in ibd_dataset · cbfa9c09
  Valerio Maggio authored Sep 11, 2017
  
  cbfa9c09
- removed unused script files · d0f38727
  Valerio Maggio authored Sep 11, 2017
  
  d0f38727
- removed unused script files · 11ef1ba0
  Valerio Maggio authored Sep 11, 2017
  
  11ef1ba0
- removed unused script files · cf753d67
  Valerio Maggio authored Sep 11, 2017
  
  cf753d67
- renamed data manipulation script folder · 9bb602bd
  Valerio Maggio authored Sep 11, 2017
  
  9bb602bd
- added instructions to install MLPY · 383154ce
  Valerio Maggio authored Sep 11, 2017
  
  383154ce
- refactoring of environment files for replication + removal of hyperas (not used) · a45d0bf1
  Valerio Maggio authored Sep 11, 2017
  
  a45d0bf1
- removed hyperas dependency · 3fe88186
  Valerio Maggio authored Sep 11, 2017
  
  3fe88186
- added main runner for MLP · 9a9872ea
  Valerio Maggio authored Sep 11, 2017
  
  9a9872ea
- renamed main for phylocon-cnn net · f8f9ec96
  Valerio Maggio authored Sep 11, 2017
  
  f8f9ec96
- added settings for MLP · a62531eb
  Valerio Maggio authored Sep 11, 2017
  
  a62531eb