Commit f86afc12 authored by Alessia Marcolini's avatar Alessia Marcolini
Browse files

Add Quick Start section

parent 1f782e1f
......@@ -44,11 +44,22 @@ pip install git+https://gitlab.fbk.eu/MPBA/mlpy.git
```
## Data availability
All the data used to perform the experiments has been published on [Figshare](dx.doi.org/10.6084/m9.figshare.12052995.v1), both raw data and preprocessed data (ready-to-go).
All the data used to perform the experiments has been published on [Figshare](dx.doi.org/10.6084/m9.figshare.12052995.v1), both raw data (`original.tar.gz`) and preprocessed data (`tcga_aml.tar.gz`, `tcga_brca.tar.gz`, `tcga_kirc.tar.gz`).
## Usage
#### Quick start
To quickly reproduce our results, first download preprocessed data from [Figshare](dx.doi.org/10.6084/m9.figshare.12052995.v1). Follow instructions in the [Setup](#Setup) section and then in a shell:
```bash
for filename in *.tar.gz; do; tar zxfv $filename; done
mkdir data
mv tcga* data
./runner.sh
```
#### Input files
* Omics layer files: samples x features, tab-separated, with row & column names
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