Commit b0d49869 authored by Alessia Marcolini's avatar Alessia Marcolini
Browse files

load_data function directly in script

parent d36a1631
#%%
import argparse
import os
from itertools import combinations
import numpy as np
import pandas as pd
import argparse
from itertools import combinations
from mlpy import borda_count
from input_output import load_data
def load_data(filename):
df = pd.read_csv(filename, sep='\t', header=0, index_col=0)
var_names = df.columns.tolist()
sample_names = df.index.tolist()
data = df.values.astype(dtype=np.float)
return sample_names, var_names, data
#%%
class myArgumentParser(argparse.ArgumentParser):
......
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