Commit afbfd650 authored by Alessia Marcolini's avatar Alessia Marcolini
Browse files

Fix runner

parent f997db01
......@@ -15,7 +15,7 @@ N_SPLITS=10
python preprocessing/concat_layers.py --datafolder $DATAFOLDER --dataset $DATASET --target $TARGET --layers $LAYER1 $LAYER2 $LAYER3 --n_splits $N_SPLITS
for i in N_SPLITS
for i in {0..$N_SPLITS}
do
snakemake -f Snakefile_split --cores $THREADS --config datafolder=$DATAFOLDER outfolder=$OUTFOLDER dataset=$DATASET target=$TARGET layer1=$LAYER1 layer2=$LAYER2 split_id=$i -p
done
......
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