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MPBA
INF
Commits
66488ce3
Commit
66488ce3
authored
Feb 27, 2020
by
Alessia Marcolini
Browse files
Fix results filenames according to new rSNFi method
parent
47c7a72d
Changes
2
Hide whitespace changes
Inline
Side-by-side
postprocessing/borda_global_rSNFi.py
View file @
66488ce3
...
...
@@ -71,7 +71,7 @@ for k in range(2, N_LAYERS + 1):
DATASET
,
TARGET
,
MODEL
,
f
'
{
i
}
/
{
MODE
}
/
{
layers_concat
}
_t
r
_
{
MODEL
}
_KBest_featurelist.txt'
,
f
'
{
i
}
/
{
MODE
}
/
{
layers_concat
}
_t
s
_
{
MODEL
}
_KBest_featurelist.txt'
,
)
feats
=
pd
.
read_csv
(
file_featureList
,
sep
=
'
\t
'
)
all_feats
.
extend
(
list
(
feats
.
FEATURE_NAME
))
...
...
@@ -95,7 +95,7 @@ for k in range(2, N_LAYERS + 1):
DATASET
,
TARGET
,
MODEL
,
f
'
{
split_id
}
/
{
MODE
}
/
{
layers_concat
}
_t
r
_
{
MODEL
}
_KBest_featurelist.txt'
,
f
'
{
split_id
}
/
{
MODE
}
/
{
layers_concat
}
_t
s
_
{
MODEL
}
_KBest_featurelist.txt'
,
)
feats
=
pd
.
read_csv
(
file_featureList
,
sep
=
'
\t
'
)
...
...
@@ -109,7 +109,7 @@ for k in range(2, N_LAYERS + 1):
DATASET
,
TARGET
,
MODEL
,
f
'
{
split_id
}
/
{
MODE
}
/
{
layers_concat
}
_t
r
_
{
MODEL
}
_KBest_ranking.csv.gz'
,
f
'
{
split_id
}
/
{
MODE
}
/
{
layers_concat
}
_t
s
_
{
MODEL
}
_KBest_ranking.csv.gz'
,
)
rankings
=
pd
.
read_csv
(
file_ranking
,
header
=
None
,
sep
=
'
\t
'
)
for
j
in
range
(
CV_K
*
CV_N
):
...
...
postprocessing/compute_all_metrics.py
View file @
66488ce3
...
...
@@ -112,6 +112,13 @@ for k in range_combinations:
PATH
,
f
'
{
MODE
}
/
{
layers_concat
}
_tr_
{
MODEL
}
_rankList_allmetrics.txt'
)
elif
MODE
==
'rSNFi'
:
file_log
=
os
.
path
.
join
(
PATH
,
f
'
{
MODE
}
/
{
layers_concat
}
_ts_
{
MODEL
}
_KBest.log'
)
file_metrics
=
os
.
path
.
join
(
PATH
,
f
'
{
MODE
}
/
{
layers_concat
}
_ts_
{
MODEL
}
_KBest_allmetrics.txt'
)
else
:
file_log
=
os
.
path
.
join
(
PATH
,
f
'
{
MODE
}
/
{
layers_concat
}
_tr_
{
MODEL
}
_KBest.log'
...
...
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