env.yml 514 Bytes
Newer Older
1
name: inf
Alessia Marcolini's avatar
Alessia Marcolini committed
2
channels:
3
  - conda-forge
Alessia Marcolini's avatar
Alessia Marcolini committed
4
  - bioconda
5
  - defaults
Alessia Marcolini's avatar
Alessia Marcolini committed
6
7
dependencies:
  - python=3.6
Alessia Marcolini's avatar
Alessia Marcolini committed
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
  - gsl=2.4
  - numpy=1.17.4
  - scikit-learn=0.21.3
  - libgcc=7.2.0
  - r-cvtools=0.3.2
  - r-doparallel=1.0.14
  - r-igraph=1.2.4.1
  - pandas=1.0.3
  - r-argparse=2.0.1
  - r-data.table=1.12.2
  - r-lubridate=1.7.4
  - matplotlib=3.1.1
  - tqdm=4.40.0
  - conda=4.8.0
  - snakemake=5.5.4
  - notebook=6.0.2
  - scikit-image=0.15.0
  - bokeh=1.4.0
  - umap-learn=0.3.10
  - pip=19.3.1
28
  - pip:
Alessia Marcolini's avatar
Alessia Marcolini committed
29
    - bootstrapped=0.0.2
Alessia Marcolini's avatar
Alessia Marcolini committed
30